BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039C07LP1|AL430677
(409 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 748 0.0
>3x_Contig1619
Length = 7770
Score = 748 bits (377), Expect = 0.0
Identities = 403/410 (98%), Gaps = 2/410 (0%)
Strand = Plus / Plus
Query: 1 gcggctcatccaaccgtacggttg-atgantgccgcgagggggaagatacagaaagtatt 59
|||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 2711 gcggctcatccaaccgtacggttggatga-tgccgcgagggggaagatacagaaagtatt 2769
Query: 60 ctaagtaattacctaccataggtagaataatgattataaataaacactcaatattctttt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2770 ctaagtaattacctaccataggtagaataatgattataaataaacactcaatattctttt 2829
Query: 120 tttttatatatattaadaactatattaaaaaatatatacaataatatgtattaatgaccc 179
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2830 tttttatatatattaaaaactatattaaaaaatatatacaataatatgtattaatgaccc 2889
Query: 180 cgcgaccatagcatggtcggggaaaacaataatcaatattcttttcatttttattatata 239
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 2890 cgcgaccatagcatggtcgcggggaacaataatcaatattcttttcatttttattatata 2949
Query: 240 tattgtatatgtatataatatatacattatattccccgcggcacctacactggtgtatac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2950 tattgtatatgtatataatatatacattatattccccgcggcacctacactggtgtatac 3009
Query: 300 cgggtaggagaccgcgggggaaaaaagatattatattataatattgataatcataataat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3010 cgggtaggagaccgcgggggaaaaaagatattatattataatattgataatcataataat 3069
Query: 360 ctcataaatttatnccagccctcatatgttatatgagggctggtatatat 409
||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3070 ctcataaatttataccagccctcatatgttatatgagggctggtatatat 3119
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5771
Number of Sequences: 1807
Number of extensions: 5771
Number of successful extensions: 258
Number of sequences better than 1.0e-20: 1
length of query: 409
length of database: 10,358,551
effective HSP length: 16
effective length of query: 393
effective length of database: 10,329,639
effective search space: 4059548127
effective search space used: 4059548127
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)